Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015921020.1_cds_XP_016470055.1_62544
CDS Infomation

[gene=LOC107792359] [db_xref=GeneID:107792359] [protein=CDK5RAP3-like protein] [protein_id=XP_016470055.1] [location=complement(join(10413..10535,11152..11284,11679..11887,12110..12646,12750..12902,12992..13127,13234..13328,13426..13520,15190..15324,15434..15494))] [gbkey=CDS]
Sequence

ATGCAGAGCCAAGACGATATTCGTAATCTTCCAGTCGACATAGCATTCGCTCGCCTCGGA
GAGTGGTTGGCTGATCGGAAGAGAATTCCGGCGGATTGGCGGAAGCGACTTGCGGCTGTG
AGAGCTAAGATTACGATGTCGTTCGCTTCGCTGCCTAAAGACATTGATCCTTACTTTCAC
ACTCTTGATGTTGAAGGGATCGGTTATTTGGAAGCCAAAAAAATATATGAGATTCTTCTG
AAGTCAGCTCCAGAAAGCCGTAATATTTTTGGTCGGCTTTCAGGTGATGCTGGTGTTTGG
GAAGCAATAGTGCGTGCCTATGAGAAGGAATACATTTTCCTTGGTGAAGCTGCTCAGACT
ATGGTCCAAAATGTTAACTATGAGATCCCCTATCATAAGAAGCAGATTCAGAAGACACAG
CAGCAACTAGCTGAATTGGAGCGCAAAGAAACTGATATAAAAAGAAATGCAGCTGTTTCG
GCGTCTAAATATGTAGAGGCTTGTCAGGAGCTGGGCCTGCAGGGAATAAATGTGAGGTCA
GAACTTTTAGAAACTGCCACTAAATCTCTTCCAACCACATTTAGCAGAATCTTGGAAGTA
CTTAATGGTGATTCTGTCTCACGGGCTACTGAGTTTTACTCAGATTTTGTCAAAGATGCT
CATACAGAAAAGGATAAAACCGCTGCTGTTGTGTTACTAAATCTGAGGAGTGTTCGTGAA
AGGCCCCCTTCGACTGATGTTTCCATAAGCTCTGAAGTATTGGAGGTTATGAAAGCTCAA
GGAGGATATAATGACTTAGGTCAAATGACTGTAGAAACTGATATTGCAGCTGATGGGATT
GACTGGGATATTACTTTAGATAGCTCTCAAATTGATTGGGACATTGGCACTGTGGAAGAA
ACAGAAGAAAATGGAAATGGTTTGGGTCCCTATGAGATTGTTAATGCAAGCGATATTTTG
CCATCTCCTCGTAATGACAGTGTAGAATCTCATCAGACCGCAAATGAAGAAGGATTCTCA
GCTCCTGAGGTCTCTGCATCAGAAATATCTTGGGATATAAGTGTTGACAATCCTCAAGTC
GATGTGATTGAAGAAGACAGTTCACAAAATAATGCTGTGGAACTACGTTCTCTTCAAAAC
AATTTAACTGCAGAGAGGAGTCCTCTACTAGAGACAGAGTACAGGAATAAGATACTTGAT
GACTTATTTGAGGTGAAAGCATTCTTGAATCAACGGTTGATTGAGCTAAGGAACGAAGAA
ACTACGTCTTTACAACATCAAGTCCAAGCAGTTGCTCCGCTTGTTCTGCAGCAGTACTCT
TCTGATATAATTCAGACAATGCTATCTGACGTTTCCTCAGCCATTTCATTGCTTACAAAT
AGGAAAACAAGGGACATGATCATGATCCTCAACTCCAAAAGGTTTTTGGATCGGTTGCTC
AATACTTTGGAGGAGAAAAAGCGTCAGGAAGCCAAGTTAAAGGACGGATTAAAGGACTTG
TCTACTAGGCGTATGGAACTTCAGAATTCAATGTCTTCATCTTGGCCAAAACAAGAAGCA
GCTATTGCGAAGACCAGGGAACTGAAGAAACTTTGTGAGAGTACACTTTCATCCATGTTT
GACGGACGGCCTGTCAACATCATAGGAGAGATTAATGCATTGTTAATTAGCAGCTAG

Peptide Sequence

PEP ID

XP_016470055.1
PEP Infomation

PREDICTED: CDK5RAP3-like protein [Nicotiana tabacum]
Sequence

MQSQDDIRNLPVDIAFARLGEWLADRKRIPADWRKRLAAVRAKITMSFASLPKDIDPYFH
TLDVEGIGYLEAKKIYEILLKSAPESRNIFGRLSGDAGVWEAIVRAYEKEYIFLGEAAQT
MVQNVNYEIPYHKKQIQKTQQQLAELERKETDIKRNAAVSASKYVEACQELGLQGINVRS
ELLETATKSLPTTFSRILEVLNGDSVSRATEFYSDFVKDAHTEKDKTAAVVLLNLRSVRE
RPPSTDVSISSEVLEVMKAQGGYNDLGQMTVETDIAADGIDWDITLDSSQIDWDIGTVEE
TEENGNGLGPYEIVNASDILPSPRNDSVESHQTANEEGFSAPEVSASEISWDISVDNPQV
DVIEEDSSQNNAVELRSLQNNLTAERSPLLETEYRNKILDDLFEVKAFLNQRLIELRNEE
TTSLQHQVQAVAPLVLQQYSSDIIQTMLSDVSSAISLLTNRKTRDMIMILNSKRFLDRLL
NTLEEKKRQEAKLKDGLKDLSTRRMELQNSMSSSWPKQEAAIAKTRELKKLCESTLSSMF
DGRPVNIIGEINALLISS

Transcript Sequence

Gene sequence data has not been registered.